Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | A6U92_24520 | O31568 | - | 1621757 - 1622800 | 35781.6 |
| abc transporter substrate-binding protein | A6U92_24525 | Not Available | - | 1622800 - 1623807 | 35561.4 |
| ligand-gated channel | A6U92_24530 | P06971 | + | 1624041 - 1626161 | 77215.0 |
| dihydrodipicolinate synthase family protein | A6U92_24535 | O69782 | - | 1626214 - 1627140 | 33559.5 |
| hypothetical protein | A6U92_24540 | P30795 | - | 1627253 - 1628422 | 43716.0 |
| hypothetical protein | A6U92_24545 | P75797 | - | 1628594 - 1630090 | 54020.9 |
| hypothetical protein | A6U92_24550 | Not Available | - | 1630138 - 1630614 | 17229.2 |
| hypothetical protein | A6U92_24555 | Not Available | - | 1630627 - 1631022 | 13933.6 |
| fad-dependent oxidoreductase | A6U92_24560 | Q88Q83 | + | 1631621 - 1632790 | 40675.9 |
| hypothetical protein | A6U92_24565 | Not Available | + | 1632783 - 1633076 | 10360.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
