Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtb | A6U92_00590 | Not Available | + | 115849 - 117465 | 57594.0 |
| urea abc transporter permease subunit urtc | A6U92_00595 | Not Available | + | 117462 - 118640 | 42681.1 |
| urea abc transporter atp-binding protein urtd | A6U92_00600 | Not Available | + | 118646 - 119407 | 27829.5 |
| hypothetical protein | A6U92_00605 | Not Available | + | 119484 - 120002 | 19393.9 |
| urea abc transporter atp-binding subunit urte | A6U92_00610 | Not Available | + | 120016 - 120711 | 25222.6 |
| polyhydroxybutyrate depolymerase | A6U92_00615 | Not Available | + | 120965 - 122185 | 43153.0 |
| urease accessory protein ured | A6U92_00620 | Q8U544 | + | 122116 - 122943 | 29926.2 |
| urease subunit gamma | A6U92_00625 | B9JR86 | + | 123021 - 123323 | 11140.7 |
| hypothetical protein | A6U92_00630 | P42878 | + | 123336 - 123593 | 9117.09 |
| urease subunit beta | A6U92_00635 | B5ZMP3 | + | 123612 - 123917 | 11046.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
