Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U92_23170 | Not Available | - | 1321936 - 1322865 | 36002.1 |
| glucose-1-phosphate thymidylyltransferase | A6U92_23175 | P55254 | - | 1323210 - 1324076 | 32148.4 |
| dtdp-4-dehydrorhamnose reductase | A6U92_23180 | P55463 | - | 1324073 - 1325002 | 32637.5 |
| dtdp-glucose 4,6-dehydratase | A6U92_23185 | P55462 | - | 1324999 - 1326060 | 39476.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | A6U92_23190 | P55468 | - | 1326065 - 1326640 | 21725.8 |
| hypothetical protein | A6U92_23195 | Not Available | - | 1327062 - 1327283 | 8664.66 |
| hypothetical protein | A6U92_23200 | Not Available | - | 1327977 - 1328189 | 7508.84 |
| transposase | A6U92_23205 | P17985 | + | 1328719 - 1328985 | 10142.4 |
| transposase | A6U92_23210 | P24577 | + | 1329018 - 1329821 | 31226.3 |
| hypothetical protein | A6U92_23215 | Not Available | - | 1330060 - 1331133 | 41745.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
