Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | A6U92_00490 | Not Available | - | 95206 - 95715 | 18879.3 |
| dna-binding response regulator | A6U92_00495 | B2S753 | - | 95819 - 96523 | 25980.7 |
| flagellar export protein flij | A6U92_00500 | Not Available | + | 96967 - 97317 | 13396.9 |
| hypothetical protein | A6U92_00505 | Not Available | - | 97694 - 97969 | 10337.5 |
| hypothetical protein | A6U92_00510 | Not Available | - | 98267 - 99301 | 36433.8 |
| 3'(2'),5'-bisphosphate nucleotidase | A6U92_00515 | Q8Z153 | - | 99381 - 100154 | 27439.9 |
| branched-chain amino acid abc transporter permease livh | A6U92_00520 | Not Available | + | 100511 - 101413 | 32248.8 |
| branched-chain amino acid abc transporter permease | A6U92_00525 | Not Available | + | 101418 - 102815 | 50783.5 |
| abc transporter atp-binding protein | A6U92_00530 | P0A194 | + | 102815 - 103678 | 31301.9 |
| abc transporter atp-binding protein | A6U92_00535 | Not Available | + | 103678 - 104406 | 26380.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
