Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | A6U92_22505 | A1A970 | - | 1178476 - 1179402 | 33602.4 |
| peptide abc transporter | A6U92_22510 | P33950 | - | 1179416 - 1180921 | 54937.3 |
| peptide abc transporter | A6U92_22515 | Q6D3B0 | - | 1181003 - 1182514 | 55274.6 |
| hypothetical protein | A6U92_22520 | Not Available | - | 1182526 - 1183314 | 28334.9 |
| hypothetical protein | A6U92_22525 | Not Available | - | 1183723 - 1183968 | 9061.89 |
| hypothetical protein | A6U92_22530 | Not Available | - | 1184236 - 1184679 | 16050.4 |
| histidine kinase | A6U92_22535 | B2SB67 | + | 1184884 - 1185903 | 36870.1 |
| chemotaxis protein | A6U92_22540 | Not Available | + | 1186208 - 1188040 | 65262.7 |
| sodium transporter | A6U92_22545 | O34524 | - | 1188355 - 1189305 | 32826.4 |
| na(+)/h(+) antiporter nhaa | A6U92_22550 | Not Available | + | 1189597 - 1190802 | 42258.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
