Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| quinate dehydrogenase | A6U92_21835 | Q9XD78 | + | 1042914 - 1045349 | 86232.9 |
| cell division protein | A6U92_21840 | Not Available | + | 1045704 - 1047464 | 63882.8 |
| dna polymerase iii subunit chi | A6U92_21845 | Not Available | - | 1047488 - 1047937 | 16902.8 |
| leucyl aminopeptidase | A6U92_21850 | Q8UGC8 | - | 1047970 - 1049460 | 52265.1 |
| lps export abc transporter permease lptf | A6U92_21855 | Not Available | + | 1049737 - 1050906 | 42683.3 |
| lps export abc transporter permease lptg | A6U92_21860 | Not Available | + | 1050903 - 1051991 | 39573.5 |
| organic solvent tolerance protein | A6U92_21865 | Q0VMV5 | + | 1051991 - 1054363 | 87843.9 |
| molecular chaperone sura | A6U92_21870 | Not Available | + | 1054657 - 1055601 | 35061.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | A6U92_21875 | Q8UGD4 | + | 1055619 - 1056638 | 35560.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | A6U92_21880 | Q8UGD5 | + | 1056638 - 1057480 | 30588.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
