Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia caryophylli
Accession NumberFXAH00000000.1
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death family protein | SAMN06295900_115147 | Not Available | - | 5253488 - 5253721 | 8302.18 |
| pas domain s-box-containing protein | SAMN06295900_115148 | Not Available | + | 5254117 - 5256282 | 77156.7 |
| two component transcriptional regulator, luxr family | SAMN06295900_115149 | Not Available | + | 5256279 - 5256929 | 23672.6 |
| response regulator receiver protein | SAMN06295900_115150 | Not Available | + | 5257086 - 5257511 | 15536.4 |
| hypothetical protein | SAMN06295900_115151 | Not Available | - | 5257565 - 5257879 | 11077.4 |
| hypothetical protein | SAMN06295900_115152 | Not Available | - | 5258184 - 5258888 | 25300.7 |
| periplasmic sensor diguanylate cyclase/phosphodiesterase | SAMN06295900_115153 | Not Available | - | 5258901 - 5262302 | 125357.0 |
| outer membrane protein (porin) | SAMN06295900_115154 | Not Available | - | 5262689 - 5263828 | 40194.6 |
| type vi secretion system protein impl | SAMN06295900_115155 | Not Available | - | 5263987 - 5266171 | 78353.0 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN06295900_1161 | Not Available | - | 5266354 - 5267436 | 38363.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.