Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia caryophylli
Accession NumberFXAH00000000.1
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron-regulated abc transporter permease protein sufd | SAMN06295900_10376 | Not Available | + | 1454136 - 1455461 | 48793.7 |
| cysteine desulfurase / selenocysteine lyase | SAMN06295900_10377 | Not Available | + | 1455458 - 1456711 | 44924.1 |
| nitrogen fixation protein nifu | SAMN06295900_10378 | Not Available | + | 1456708 - 1457163 | 16225.2 |
| fes assembly suf system protein | SAMN06295900_10379 | Not Available | + | 1457175 - 1457552 | 13189.9 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit | SAMN06295900_10380 | Not Available | + | 1457555 - 1457887 | 11745.9 |
| ferredoxin-nadp reductase | SAMN06295900_10381 | Not Available | + | 1457976 - 1458689 | 26107.3 |
| aldose 1-epimerase | SAMN06295900_10382 | Not Available | - | 1458749 - 1459840 | 39380.0 |
| transcriptional regulator, arac family | SAMN06295900_10383 | Not Available | - | 1459880 - 1461100 | 45071.0 |
| xylose-binding protein | SAMN06295900_10384 | Not Available | + | 1461430 - 1462458 | 36758.2 |
| xylose abc transporter atp-binding protein | SAMN06295900_10385 | Not Available | + | 1462532 - 1464091 | 55844.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.