Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax fermentans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax fermentans str. JCM 7819
Accession NumberMTJN00000000.1
Gene Summary
Adenine Count
910782 bp
Thymine Count
879289 bp
Guanine Count
1313664 bp
Cytosine Count
1364006 bp
Genome Length
4467741 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | RF819_02415 | Not Available | - | 514683 - 515816 | 41037.3 |
| hypothetical protein | RF819_02420 | Not Available | + | 515958 - 516260 | 10468.8 |
| laccase | RF819_02425 | Not Available | - | 516189 - 516986 | 28100.3 |
| ribosomal protein s12 methylthiotransferase | RF819_02430 | Not Available | - | 516961 - 518688 | 63540.2 |
| antibiotic biosynthesis monooxygenase | RF819_02435 | Not Available | + | 518832 - 519134 | 11263.5 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | RF819_02440 | Not Available | + | 519180 - 519875 | 24774.7 |
| nudix hydrolase | RF819_02445 | Not Available | + | 519949 - 520494 | 20710.6 |
| dna polymerase iii subunit epsilon | RF819_02450 | Not Available | + | 520654 - 522078 | 52813.7 |
| Trna-val | Not Available | Not Available | + | 522293 - 522367 | Not Available |
| Trna-asn | Not Available | Not Available | + | 522501 - 522576 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
