Bifidobacterium pseudocatenulatum

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum is a gram-positive, rod-shaped bacterium that thrives in a thermophilic environment, characterized as mesophilic, with a temperature preference range of 25-45°C. As a heterotroph, it obtains its energy by breaking down complex organic molecules, specifically by fermenting carbohydrates and peptides. This microbe produces ATP through anaerobic fermentation of glucose, yielding lactate, acetate, and formate as byproducts. Bifidobacterium pseudocatenulatum is a ubiquitous microbe, colonizing various body sites, including the oral cavity, gut, vagina, and skin, in all species of mammals. It is an obligate anaerobe, unable to survive in the presence of oxygen, which necessitates the development of specialized membrane-bound enzymes to facilitate anaerobic metabolism. One of the distinctive features of Bifidobacterium pseudocatenulatum is its ability to produce various bioactive compounds, including conjugated linoleic acid, which exhibits immunomodulatory effects. Additionally, it has been associated with the production of antimicrobial peptides, contributing to its ability to inhibit the growth of pathogenic bacteria. In the context of human health, Bifidobacterium pseudocatenulatum is considered a beneficial microbe, playing a crucial role in maintaining gut homeostasis and immune system development. Furthermore, it has been linked to the alleviation of symptoms in patients suffering from irritable bowel syndrome (IBS), inflammatory bowel disease (IBD), and other gastrointestinal disorders.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum

Accession NumberCYZC00000000.1

Gene Summary

Adenine Count

503302 bp

Thymine Count

498081 bp

Guanine Count

652572 bp

Cytosine Count

647462 bp

Genome Length

2303871 bp

Protein-coding Genes

1947 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
isoaspartyl peptidase/l-asparaginaseDXA79_07900Not Available+1821089 - 182202732592.3
abc transporter substrate-binding proteinDXA79_07905Not Available-1822158 - 182380760450.4
glutamate racemaseDXA79_07915Not Available-1824199 - 182497528371.8
diaminopimelate epimeraseDXA79_07920Not Available+1825074 - 182597331925.7
hypothetical proteinDXA79_07925Not Available-1826090 - 182675524284.7
php domain-containing proteinDXA79_07930Not Available+1826848 - 182777433716.9
duf3107 domain-containing proteinDXA79_07935Not Available-1827903 - 18281277732.08
aminoglycoside phosphotransferaseDXA79_07940Not Available-1828188 - 182972655587.5
atp-dependent helicaseDXA79_07945Not Available+1829853 - 183136155897.1
hydrolaseDXA79_07950Not Available-1831385 - 183296257516.9

Displaying genes 3601 – 3610 of 3976 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites