Bifidobacterium pseudocatenulatum

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum is a gram-positive, rod-shaped bacterium that thrives in a thermophilic environment, characterized as mesophilic, with a temperature preference range of 25-45°C. As a heterotroph, it obtains its energy by breaking down complex organic molecules, specifically by fermenting carbohydrates and peptides. This microbe produces ATP through anaerobic fermentation of glucose, yielding lactate, acetate, and formate as byproducts. Bifidobacterium pseudocatenulatum is a ubiquitous microbe, colonizing various body sites, including the oral cavity, gut, vagina, and skin, in all species of mammals. It is an obligate anaerobe, unable to survive in the presence of oxygen, which necessitates the development of specialized membrane-bound enzymes to facilitate anaerobic metabolism. One of the distinctive features of Bifidobacterium pseudocatenulatum is its ability to produce various bioactive compounds, including conjugated linoleic acid, which exhibits immunomodulatory effects. Additionally, it has been associated with the production of antimicrobial peptides, contributing to its ability to inhibit the growth of pathogenic bacteria. In the context of human health, Bifidobacterium pseudocatenulatum is considered a beneficial microbe, playing a crucial role in maintaining gut homeostasis and immune system development. Furthermore, it has been linked to the alleviation of symptoms in patients suffering from irritable bowel syndrome (IBS), inflammatory bowel disease (IBD), and other gastrointestinal disorders.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum

Accession NumberCYZC00000000.1

Gene Summary

Adenine Count

503302 bp

Thymine Count

498081 bp

Guanine Count

652572 bp

Cytosine Count

647462 bp

Genome Length

2303871 bp

Protein-coding Genes

1947 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gnat family n-acetyltransferaseDXA79_04220Not Available+963765 - 96450528059.5
linear amide c-n hydrolaseDXA79_04225Not Available+964823 - 96577335203.9
abc transporter permeaseDXA79_04230Not Available-965935 - 96662424978.9
hypothetical proteinDXA79_04235Not Available-966605 - 9668418873.62
merr family transcriptional regulatorDXA79_04240Not Available+967065 - 96752917329.6
zn-dependent alcohol dehydrogenaseDXA79_04245Not Available+967588 - 96863436849.9
carboxymuconolactone decarboxylase family proteinDXA79_04250Not Available+968686 - 96945328350.8
5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferaseDXA79_04255Not Available-969567 - 97069742024.0
gtra family proteinDXA79_04260Not Available+970843 - 97129516481.1
cation diffusion facilitator family transporterDXA79_04265Not Available+971392 - 97242037331.0

Displaying genes 2901 – 2910 of 3976 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites