Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. B1
Accession NumberJGVR00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5291 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | CP98_00209 | Not Available | - | 227887 - 229029 | 40033.8 |
| transcriptional regulator | CP98_00210 | Not Available | + | 229083 - 229529 | 15791.7 |
| putative mccf-like protein (microcin c7 resistance) precursor | CP98_00211 | Not Available | + | 229526 - 230563 | 36326.9 |
| zn-dependent dipeptidase, microsomal dipeptidase precursor | CP98_00212 | Not Available | - | 230556 - 231854 | 45642.5 |
| leucyl/phenylalanyl-trna--protein transferase | CP98_00213 | Not Available | + | 231936 - 232688 | 26672.1 |
| nadh:ubiquinone oxidoreductase 17.2 kd subunit precursor | CP98_00214 | Not Available | - | 233137 - 233535 | 14669.9 |
| exported protein | CP98_00215 | Not Available | - | 233586 - 234143 | 19634.8 |
| regulatory protein recx | CP98_00216 | Not Available | - | 234192 - 234743 | 20079.8 |
| acyl-coa synthetase | CP98_00217 | Not Available | + | 234880 - 236640 | 64513.7 |
| diguanylate cyclase (ggdef) domain-containing protein | CP98_00218 | Not Available | + | 236752 - 239052 | 83095.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.