Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae
Accession NumberQRAL00000000.1
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| precorrin-4 c(11)-methyltransferase | DAH51_03525 | Not Available | - | 763928 - 764713 | 27215.8 |
| precorrin methylase | DAH51_03530 | Not Available | - | 764710 - 765072 | 11582.0 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | DAH51_03535 | Not Available | - | 765069 - 766277 | 41860.7 |
| cobalt-precorrin-6a reductase | DAH51_03540 | Not Available | + | 766276 - 767040 | 26718.3 |
| precorrin-3b c(17)-methyltransferase | DAH51_03545 | Not Available | - | 767001 - 767783 | 27483.2 |
| precorrin-2 c(20)-methyltransferase | DAH51_03550 | Not Available | - | 767780 - 768502 | 26180.8 |
| precorrin-8x methylmutase | DAH51_03555 | Not Available | - | 768499 - 769128 | 21590.1 |
| dna polymerase iii subunit epsilon | DAH51_03565 | Not Available | + | 769858 - 770790 | 35576.4 |
| crp/fnr family transcriptional regulator | DAH51_03570 | Not Available | + | 771430 - 772083 | 23610.6 |
| duf4071 domain-containing protein | DAH51_03575 | Not Available | - | 772096 - 773547 | 51835.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.