Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae
Accession NumberQRAL00000000.1
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-histidine n(alpha)-methyltransferase | DAH51_03425 | Not Available | + | 741683 - 742639 | 34682.4 |
| type ii toxin-antitoxin system pard family antitoxin | DAH51_03430 | Not Available | + | 742998 - 743246 | 8901.84 |
| type ii toxin-antitoxin system rele/pare family toxin | DAH51_03435 | Not Available | + | 743243 - 743548 | 11435.8 |
| had family phosphatase | DAH51_03440 | Not Available | - | 743562 - 744323 | 27137.8 |
| duf1176 domain-containing protein | DAH51_03445 | Not Available | - | 744356 - 745411 | 36918.9 |
| nupc/nupg family nucleoside cnt transporter | DAH51_03450 | Not Available | - | 745478 - 746791 | 45139.5 |
| mfs transporter | DAH51_03455 | Not Available | + | 746953 - 748200 | 43541.1 |
| intradiol ring-cleavage dioxygenase | DAH51_03460 | Not Available | + | 748315 - 749217 | 31190.0 |
| dna-binding response regulator | DAH51_03465 | Not Available | + | 749262 - 749993 | 27052.6 |
| hamp domain-containing protein | DAH51_03470 | Not Available | + | 750002 - 751354 | 48745.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.