Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae
Accession NumberQRAL00000000.1
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DAH51_05040 | Not Available | + | 1119261 - 1121591 | 82585.4 |
| cytochrome c | DAH51_05045 | Not Available | - | 1121908 - 1122420 | 17983.9 |
| methylamine dehydrogenase (amicyanin) light chain | DAH51_05050 | Not Available | - | 1122433 - 1122978 | 19276.9 |
| methylamine utilization protein maud | DAH51_05055 | Not Available | - | 1123005 - 1123607 | 20687.4 |
| methylamine utilization protein maue | DAH51_05060 | Not Available | - | 1123615 - 1124148 | 18038.4 |
| methylamine dehydrogenase | DAH51_05065 | Not Available | - | 1124151 - 1125329 | 42574.8 |
| mfs transporter | DAH51_05070 | Not Available | - | 1125475 - 1126656 | 39238.9 |
| tetr/acrr family transcriptional regulator | DAH51_05075 | Not Available | - | 1126731 - 1127384 | 24224.6 |
| cytochrome c | DAH51_05080 | Not Available | + | 1127598 - 1128077 | 16399.1 |
| sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein | DAH51_05085 | Not Available | + | 1128182 - 1130053 | 68242.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.