Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae
Accession NumberQRAL00000000.1
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-atp diphosphatase | DAH51_03930 | Not Available | - | 837423 - 837743 | 11459.8 |
| pep-cterm sorting domain-containing protein | DAH51_03935 | Not Available | - | 837786 - 838034 | 8176.02 |
| imidazole glycerol phosphate synthase subunit hisf | DAH51_03940 | Not Available | - | 838211 - 838975 | 26358.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DAH51_03945 | Not Available | - | 839096 - 839833 | 25424.3 |
| imidazole glycerol phosphate synthase subunit hish | DAH51_03950 | Not Available | - | 839922 - 840536 | 21759.1 |
| gtp cyclohydrolase | DAH51_03955 | Not Available | - | 840533 - 840820 | 10226.3 |
| imidazoleglycerol-phosphate dehydratase hisb | DAH51_03960 | Not Available | - | 840849 - 841436 | 21459.7 |
| hypothetical protein | DAH51_03965 | Not Available | + | 841535 - 842011 | 17543.7 |
| hypothetical protein | DAH51_03970 | Not Available | - | 842039 - 842728 | 24156.7 |
| class ii fumarate hydratase | DAH51_03975 | Not Available | + | 842954 - 844339 | 48421.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.