Sphingobium yanoikuyae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium yanoikuyae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium yanoikuyae

Accession NumberQRAL00000000.1

Gene Summary

Adenine Count

1044020 bp

Thymine Count

1039951 bp

Guanine Count

1862718 bp

Cytosine Count

1875819 bp

Genome Length

5822508 bp

Protein-coding Genes

5290 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
conjugal transfer protein trbeDAH51_23910Not Available+5001824 - 500428089656.7
p-type conjugative transfer protein trbjDAH51_23915Not Available+5004277 - 500504727312.3
conjugal transfer protein trbkDAH51_23920Not Available+5005058 - 500542313238.8
p-type conjugative transfer protein trblDAH51_23925Not Available+5005428 - 500679244934.2
conjugal transfer protein trbfDAH51_23930Not Available+5006792 - 500747525568.4
p-type conjugative transfer protein trbgDAH51_23935Not Available+5007472 - 500852138257.8
conjugal transfer protein traiDAH51_23940Not Available+5008518 - 500973842752.6
duf2274 domain-containing proteinDAH51_23945Not Available+5009738 - 50099778778.73
lysr family transcriptional regulatorDAH51_23950Not Available-5009974 - 501087633232.2
marr family transcriptional regulatorDAH51_23955Not Available+5011089 - 501161919128.1

Displaying genes 4721 – 4730 of 5462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites