Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae
Accession NumberQRAL00000000.1
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copd | DAH51_23575 | Not Available | - | 4946299 - 4947225 | 32014.3 |
| copper resistance protein copc | DAH51_23580 | Not Available | - | 4947230 - 4947598 | 12866.8 |
| nad(p)/fad-dependent oxidoreductase | DAH51_23585 | Not Available | + | 4947806 - 4948804 | 34886.8 |
| four-helix bundle copper-binding protein | DAH51_23595 | Not Available | + | 4949087 - 4949491 | 14546.4 |
| hypothetical protein | DAH51_23600 | Not Available | - | 4949580 - 4950116 | 19800.6 |
| duf411 domain-containing protein | DAH51_23605 | Not Available | - | 4950479 - 4950928 | 15362.8 |
| duf305 domain-containing protein | DAH51_23610 | Not Available | - | 4950991 - 4951374 | 13959.4 |
| copper resistance protein b | DAH51_23615 | Not Available | - | 4951424 - 4952722 | 45487.2 |
| copper resistance system multicopper oxidase | DAH51_23620 | Not Available | - | 4952712 - 4954730 | 73292.5 |
| rna polymerase sigma factor | DAH51_23625 | Not Available | - | 4954819 - 4955391 | 21264.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.