Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae
Accession NumberQRAL00000000.1
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| virb8 family protein | DAH51_21705 | Not Available | - | 4570660 - 4571352 | 26069.7 |
| type iv secretion system protein virb6 | DAH51_21710 | Not Available | - | 4571755 - 4572762 | 34745.7 |
| type iv secretion system protein virb5 | DAH51_21715 | Not Available | - | 4573094 - 4573813 | 25802.3 |
| virb4 family type iv secretion/conjugal transfer atpase | DAH51_21720 | Not Available | - | 4573826 - 4576216 | 89055.6 |
| type vi secretion protein | DAH51_21725 | Not Available | - | 4576209 - 4576532 | 11685.7 |
| hypothetical protein | DAH51_21730 | Not Available | - | 4576609 - 4576908 | 10353.9 |
| hypothetical protein | DAH51_21735 | Not Available | - | 4576974 - 4577660 | 23488.9 |
| hypothetical protein | DAH51_21745 | Not Available | + | 4578496 - 4579182 | 24653.7 |
| thermonuclease family protein | DAH51_21750 | Not Available | + | 4579221 - 4579823 | 21391.5 |
| hypothetical protein | DAH51_21755 | Not Available | + | 4579868 - 4580140 | 9550.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.