Sphingobium yanoikuyae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium yanoikuyae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium yanoikuyae

Accession NumberQRAL00000000.1

Gene Summary

Adenine Count

1044020 bp

Thymine Count

1039951 bp

Guanine Count

1862718 bp

Cytosine Count

1875819 bp

Genome Length

5822508 bp

Protein-coding Genes

5290 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
3-carboxyethylcatechol 2,3-dioxygenaseDAH51_21655Not Available-4558829 - 455978834407.1
tonb-dependent receptorDAH51_21660Not Available-4559927 - 456241988657.2
cupin domain-containing proteinDAH51_21665Not Available-4562476 - 456300018674.1
alcohol dehydrogenaseDAH51_21670Not Available-4563016 - 456413739815.1
gntr family transcriptional regulatorDAH51_21675Not Available+4564410 - 456505424310.0
dna primaseDAH51_21680Not Available-4565079 - 456581627594.4
type iv secretory system conjugative dna transfer family proteinDAH51_21685Not Available-4565818 - 456763867151.4
p-type dna transfer atpase virb11DAH51_21690Not Available-4567610 - 456862337180.7
type iv secretion system protein virb10DAH51_21695Not Available-4568620 - 456981942221.8
conjugal transfer proteinDAH51_21700Not Available-4569821 - 457066331114.1

Displaying genes 4291 – 4300 of 5462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites