Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae
Accession NumberQRAL00000000.1
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ppx/gppa family phosphatase | DAH51_06960 | Not Available | - | 1549288 - 1550811 | 54968.8 |
| rna degradosome polyphosphate kinase | DAH51_06965 | Not Available | - | 1550819 - 1552957 | 80102.2 |
| chromosomal replication initiator dnaa | DAH51_06970 | Not Available | - | 1552961 - 1553593 | 22813.2 |
| heavy-metal-associated domain-containing protein | DAH51_06975 | Not Available | - | 1553590 - 1554885 | 45777.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | DAH51_06980 | Not Available | + | 1555105 - 1556199 | 37997.4 |
| phosphoribosylglycinamide formyltransferase | DAH51_06985 | Not Available | + | 1556313 - 1557263 | 34370.2 |
| mipa/ompv family protein | DAH51_06990 | Not Available | + | 1557465 - 1558256 | 27434.0 |
| is5 family transposase | DAH51_06995 | Not Available | - | 1558275 - 1558400 | 4759.9 |
| lysr family transcriptional regulator | DAH51_07000 | Not Available | - | 1558401 - 1558728 | 12100.4 |
| giy-yig nuclease family protein | DAH51_07010 | Not Available | + | 1559079 - 1559495 | 15289.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.