Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae
Accession NumberQRAL00000000.1
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | DAH51_05945 | Not Available | - | 1325361 - 1327115 | 64640.1 |
| dna topoisomerase iv subunit a | DAH51_05950 | Not Available | - | 1327184 - 1329511 | 85739.1 |
| plasmid maintenance protein ccdb | DAH51_05955 | Not Available | - | 1329557 - 1329850 | 10892.3 |
| post-segregation antitoxin ccda | DAH51_05960 | Not Available | - | 1329850 - 1330092 | 9092.54 |
| lysr family transcriptional regulator | DAH51_05965 | Not Available | - | 1330140 - 1331051 | 33417.3 |
| trehalose-phosphatase | DAH51_05970 | Not Available | + | 1331424 - 1332188 | 26347.8 |
| glycoside hydrolase family 15 protein | DAH51_05975 | Not Available | + | 1332332 - 1334056 | 65214.6 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | DAH51_05980 | Not Available | + | 1334053 - 1335459 | 52897.3 |
| aminotransferase class v-fold plp-dependent enzyme | DAH51_05985 | Not Available | + | 1335722 - 1336996 | 47028.7 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DAH51_05990 | Not Available | + | 1337124 - 1337906 | 29590.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.