Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae
Accession NumberQRAL00000000.1
Gene Summary
Adenine Count
1044020 bp
Thymine Count
1039951 bp
Guanine Count
1862718 bp
Cytosine Count
1875819 bp
Genome Length
5822508 bp
Protein-coding Genes
5290 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme lyase ccmf/nrfe family subunit | DAH51_05640 | Not Available | - | 1266681 - 1268609 | 68977.7 |
| cytochrome c maturation protein ccme | DAH51_05645 | Not Available | - | 1268606 - 1269052 | 15683.0 |
| heme exporter protein ccmd | DAH51_05650 | Not Available | - | 1269049 - 1269180 | 4754.71 |
| heme abc transporter permease | DAH51_05655 | Not Available | - | 1269183 - 1269905 | 26238.8 |
| amidophosphoribosyltransferase | DAH51_05660 | Not Available | + | 1270090 - 1271568 | 53814.4 |
| sdr family nad(p)-dependent oxidoreductase | DAH51_05665 | Not Available | + | 1271665 - 1272381 | 24464.5 |
| class i sam-dependent methyltransferase | DAH51_05670 | Not Available | - | 1272378 - 1273646 | 47890.0 |
| deoxyribodipyrimidine photo-lyase | DAH51_05675 | Not Available | - | 1273684 - 1275060 | 52141.6 |
| rna pyrophosphohydrolase | DAH51_05680 | Not Available | + | 1275250 - 1275735 | 18587.3 |
| duf481 domain-containing protein | DAH51_05685 | Not Available | + | 1275777 - 1276676 | 33171.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.