Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS04915 | Not Available | - | 190580 - 190918 | 12898.3 |
| pqq-dependent sugar dehydrogenase | EBF16_RS04920 | Not Available | - | 191047 - 192375 | 47777.0 |
| hypothetical protein | EBF16_RS28445 | Not Available | - | 192592 - 192762 | 5536.18 |
| hypothetical protein | EBF16_RS04925 | Not Available | + | 192993 - 193196 | 7656.04 |
| n-acetyl-gamma-glutamyl-phosphate reductase | EBF16_RS04930 | Not Available | - | 193268 - 194212 | 32849.2 |
| c40 family peptidase | EBF16_RS04935 | Not Available | - | 194209 - 195117 | 32508.5 |
| marr family transcriptional regulator | EBF16_RS04940 | Not Available | - | 195077 - 195484 | 15196.2 |
| leucyl aminopeptidase family protein | EBF16_RS04945 | Not Available | - | 195548 - 196945 | 49525.1 |
| hypothetical protein | EBF16_RS04950 | Not Available | + | 197101 - 197301 | 7145.45 |
| duf4163 domain-containing protein | EBF16_RS04955 | Not Available | + | 197301 - 198143 | 30289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.