Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein recn | EBF16_RS04625 | Not Available | + | 128048 - 129709 | 57814.4 |
| putative quinol monooxygenase | EBF16_RS04630 | Not Available | + | 129851 - 130225 | 13091.9 |
| nad-dependent dna ligase liga | EBF16_RS04635 | Not Available | + | 130247 - 132358 | 76191.5 |
| hypothetical protein | EBF16_RS04640 | Not Available | + | 132473 - 132790 | 11531.6 |
| acyltransferase family protein | EBF16_RS04645 | Not Available | + | 132868 - 133896 | 38490.1 |
| winged helix-turn-helix transcriptional regulator | EBF16_RS04650 | Not Available | - | 133893 - 134285 | 14449.6 |
| nad(p)-dependent oxidoreductase | EBF16_RS04655 | Not Available | + | 134395 - 135006 | 21201.0 |
| glutathione-dependent disulfide-bond oxidoreductase | EBF16_RS04660 | Not Available | - | 135152 - 136021 | 32161.0 |
| universal stress protein | EBF16_RS04665 | Not Available | - | 136137 - 136574 | 15504.4 |
| hypothetical protein | EBF16_RS04670 | Not Available | - | 136700 - 136981 | 10248.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.