Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | EBF16_RS04475 | Not Available | - | 97577 - 99526 | 69229.9 |
| triose-phosphate isomerase | EBF16_RS04480 | Not Available | + | 99738 - 100481 | 25470.6 |
| preprotein translocase subunit secg | EBF16_RS04485 | Not Available | + | 100857 - 101234 | 12014.7 |
| ctp synthase | EBF16_RS04490 | Not Available | + | 101325 - 102956 | 59587.1 |
| nadh:flavin oxidoreductase/nadh oxidase | EBF16_RS04495 | Not Available | - | 103045 - 104157 | 39780.6 |
| tonb-dependent receptor | EBF16_RS04500 | Not Available | + | 104359 - 106899 | 92724.4 |
| hypothetical protein | EBF16_RS04505 | Not Available | + | 106893 - 107714 | 29343.9 |
| pentapeptide repeat-containing protein | EBF16_RS04510 | Not Available | - | 107721 - 108407 | 24809.7 |
| pqq-dependent sugar dehydrogenase | EBF16_RS04515 | Not Available | - | 108416 - 109564 | 41071.8 |
| gnat family n-acetyltransferase | EBF16_RS04520 | Not Available | + | 109728 - 110843 | 40924.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.