Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flp family type ivb pilin | EBF16_RS04275 | Not Available | - | 61481 - 61642 | 5514.9 |
| flp family type ivb pilin | EBF16_RS04280 | Not Available | - | 61776 - 61961 | 6592.19 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | EBF16_RS04285 | Not Available | + | 62042 - 62449 | 14893.2 |
| bacterioferritin | EBF16_RS04290 | Not Available | - | 62578 - 63057 | 18794.4 |
| bacterioferritin-associated ferredoxin | EBF16_RS04295 | Not Available | - | 63218 - 63388 | 6063.31 |
| duf418 domain-containing protein | EBF16_RS04300 | Not Available | - | 63443 - 64687 | 45569.7 |
| methyltransferase domain-containing protein | EBF16_RS04305 | Not Available | + | 64745 - 65518 | 27324.7 |
| glycoside hydrolase family 43 protein | EBF16_RS04310 | Not Available | - | 65476 - 67146 | 61294.6 |
| hypothetical protein | EBF16_RS04315 | Not Available | - | 67259 - 67732 | 17318.8 |
| phosphoribosylformylglycinamidine synthase subunit purl | EBF16_RS04320 | Not Available | - | 67823 - 70000 | 76425.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.