Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | EBF16_RS04075 | Not Available | - | 18240 - 19319 | 40205.5 |
| succinate dehydrogenase iron-sulfur subunit | EBF16_RS04080 | Not Available | + | 19596 - 20384 | 29452.2 |
| paai family thioesterase | EBF16_RS04085 | Not Available | + | 20386 - 20847 | 16638.0 |
| cell division protein zape | EBF16_RS04090 | Not Available | + | 20844 - 21956 | 41693.5 |
| malate dehydrogenase | EBF16_RS04095 | Not Available | + | 22273 - 23235 | 33249.3 |
| succinate--coa ligase subunit alpha | EBF16_RS04100 | Not Available | + | 23335 - 24219 | 29910.3 |
| 2-oxoglutarate dehydrogenase e1 component | EBF16_RS04105 | Not Available | + | 24318 - 27113 | 102563.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | EBF16_RS04110 | Not Available | + | 27122 - 28369 | 43079.9 |
| dihydrolipoyl dehydrogenase | EBF16_RS04115 | Not Available | + | 28477 - 29877 | 48420.6 |
| hypothetical protein | EBF16_RS04120 | Not Available | + | 29972 - 30247 | 10206.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.