Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| kinase | EBF16_RS28280 | Not Available | + | 5160232 - 5161038 | 28622.4 |
| c-type cytochrome | EBF16_RS28285 | Not Available | - | 5161079 - 5161702 | 20894.1 |
| prephenate dehydratase | EBF16_RS28290 | Not Available | + | 5161875 - 5162765 | 31838.1 |
| 3'-5' exoribonuclease domain-containing protein | EBF16_RS28295 | Not Available | + | 5163316 - 5164089 | 28805.1 |
| nucleotidyltransferase domain-containing protein | EBF16_RS29025 | Not Available | + | 5164082 - 5164309 | 8393.88 |
| hypothetical protein | EBF16_RS28305 | Not Available | + | 5164306 - 5164725 | 16017.2 |
| is5 family transposase | EBF16_RS28310 | Not Available | + | 5164778 - 5165590 | 30636.9 |
| hypothetical protein | EBF16_RS28315 | Not Available | + | 5165711 - 5166007 | 10941.0 |
| sterol desaturase family protein | EBF16_RS28320 | Not Available | + | 5166177 - 5166905 | 27595.9 |
| duf2141 domain-containing protein | EBF16_RS28325 | Not Available | + | 5166902 - 5167339 | 15297.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.