Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| torf family putative porin | EBF16_RS28180 | Not Available | + | 5139234 - 5140082 | 29629.9 |
| response regulator | EBF16_RS28185 | Not Available | + | 5140277 - 5140987 | 26314.7 |
| atp-binding protein | EBF16_RS28190 | Not Available | + | 5140984 - 5142318 | 49444.1 |
| serine o-acetyltransferase epsc | EBF16_RS28195 | Not Available | + | 5142434 - 5143435 | 36068.1 |
| alkaline phosphatase family protein | EBF16_RS28200 | Not Available | - | 5143473 - 5145152 | 59829.3 |
| protein-disulfide reductase dsbd family protein | EBF16_RS28205 | Not Available | + | 5145229 - 5147271 | 70267.1 |
| tlya family rna methyltransferase | EBF16_RS28210 | Not Available | + | 5147271 - 5148008 | 26179.4 |
| efflux rnd transporter periplasmic adaptor subunit | EBF16_RS28215 | Not Available | + | 5148097 - 5149161 | 37018.9 |
| efflux rnd transporter permease subunit | EBF16_RS28220 | Not Available | + | 5149166 - 5152270 | 111425.0 |
| tspo/mbr family protein | EBF16_RS28225 | Not Available | + | 5152289 - 5152837 | 19927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.