Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | EBF16_RS27885 | Not Available | - | 5079208 - 5080074 | 29883.7 |
| glycosyltransferase family 2 protein | EBF16_RS27890 | Not Available | + | 5080405 - 5081634 | 43699.9 |
| class i sam-dependent methyltransferase | EBF16_RS27895 | Not Available | + | 5081631 - 5082242 | 22681.5 |
| hypothetical protein | EBF16_RS27900 | Not Available | + | 5082246 - 5083793 | 57020.7 |
| 3-hydroxybutyrate dehydrogenase | EBF16_RS27905 | Not Available | - | 5083809 - 5084600 | 27775.3 |
| patatin-like phospholipase family protein | EBF16_RS27910 | Not Available | - | 5084597 - 5085775 | 43123.7 |
| neutral zinc metallopeptidase | EBF16_RS27915 | Not Available | + | 5085928 - 5086821 | 31541.1 |
| hypothetical protein | EBF16_RS27920 | Not Available | - | 5086828 - 5087139 | 10244.2 |
| hypothetical protein | EBF16_RS27925 | Not Available | - | 5087224 - 5087409 | 6529.9 |
| bifunctional | EBF16_RS27930 | Not Available | + | 5087502 - 5090195 | 97747.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.