Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ilvd/edd family dehydratase | EBF16_RS27785 | Not Available | - | 5058576 - 5060378 | 64436.4 |
| 2-dehydro-3-deoxygalactonokinase | EBF16_RS27790 | Not Available | + | 5060514 - 5061416 | 31429.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | EBF16_RS27795 | Not Available | + | 5061420 - 5062052 | 21462.2 |
| pas domain-containing sensor histidine kinase | EBF16_RS27800 | Not Available | - | 5062058 - 5064094 | 74594.7 |
| cox15/ctaa family protein | EBF16_RS27805 | Not Available | + | 5064232 - 5065275 | 37666.8 |
| divalent-cation tolerance protein cuta | EBF16_RS27810 | Not Available | + | 5065272 - 5065601 | 11872.2 |
| hypothetical protein | EBF16_RS27815 | Not Available | + | 5065598 - 5066389 | 27952.6 |
| 50s ribosomal protein l13 | EBF16_RS27820 | Not Available | + | 5066520 - 5066999 | 17709.7 |
| 30s ribosomal protein s9 | EBF16_RS27825 | Not Available | + | 5066999 - 5067535 | 18904.6 |
| duf3857 domain-containing protein | EBF16_RS27830 | Not Available | + | 5067720 - 5070485 | 98992.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.