Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hpr-rel-a system pqqd family peptide chaperone | EBF16_RS27485 | Not Available | + | 4994766 - 4995050 | 10349.7 |
| hprk-related kinase a | EBF16_RS27490 | Not Available | + | 4995047 - 4995910 | 30674.5 |
| nucleotidyltransferase family protein | EBF16_RS27495 | Not Available | + | 4995907 - 4996896 | 36162.0 |
| tetr/acrr family transcriptional regulator | EBF16_RS27500 | Not Available | - | 4996898 - 4997491 | 20717.8 |
| sdr family oxidoreductase | EBF16_RS27505 | Not Available | + | 4997564 - 4998277 | 24022.8 |
| chromate efflux transporter | EBF16_RS27510 | Not Available | + | 4998450 - 4999640 | 41686.9 |
| phosphatase pap2 family protein | EBF16_RS27515 | Not Available | + | 4999728 - 5000714 | 36123.7 |
| amidohydrolase | EBF16_RS27520 | Not Available | - | 5000711 - 5002087 | 48891.0 |
| type ii toxin-antitoxin system pard family antitoxin | EBF16_RS27525 | Not Available | + | 5002235 - 5002480 | 9214.91 |
| type ii toxin-antitoxin system rele/pare family toxin | EBF16_RS27530 | Not Available | + | 5002482 - 5002790 | 12017.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.