Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1971 domain-containing protein | EBF16_RS02645 | Not Available | - | 504131 - 504403 | 9892.0 |
| atp-binding protein | EBF16_RS02650 | Not Available | - | 504405 - 504848 | 16650.0 |
| atp-binding protein | EBF16_RS02655 | Not Available | + | 504848 - 505168 | 11949.4 |
| Helicase | EBF16_RS05355 | Not Available | + | 287042 - 288688 | 61296.2 |
| hypothetical protein | EBF16_RS28455 | Not Available | + | 288734 - 288904 | 6380.64 |
| hypothetical protein | EBF16_RS05360 | Not Available | + | 288889 - 289080 | 7030.49 |
| hypothetical protein | EBF16_RS05365 | Not Available | + | 289080 - 289307 | 8629.86 |
| hypothetical protein | EBF16_RS05370 | Not Available | - | 289496 - 290023 | 18340.5 |
| Lysozyme | EBF16_RS05375 | Not Available | - | 290020 - 290616 | 21340.0 |
| Holin | EBF16_RS05380 | Not Available | - | 290606 - 290839 | 8541.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.