Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zf-tfiib domain-containing protein | EBF16_RS27165 | Not Available | + | 4933922 - 4934224 | 11185.2 |
| hypothetical protein | EBF16_RS27170 | Not Available | + | 4934389 - 4934736 | 12553.1 |
| heavy metal translocating p-type atpase | EBF16_RS27175 | Not Available | + | 4934786 - 4937272 | 87735.3 |
| hypothetical protein | EBF16_RS27180 | Not Available | + | 4937303 - 4937767 | 16620.9 |
| bestrophin family protein | EBF16_RS27185 | Not Available | + | 4937820 - 4938695 | 32306.7 |
| carbonic anhydrase | EBF16_RS27190 | Not Available | + | 4938841 - 4939464 | 22149.7 |
| duf4365 domain-containing protein | EBF16_RS27195 | Not Available | + | 4939676 - 4941007 | 50379.8 |
| argonaute/piwi family protein | EBF16_RS27200 | Not Available | + | 4940997 - 4942454 | 54375.6 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | EBF16_RS27205 | Not Available | - | 4942557 - 4943459 | 31928.5 |
| metal/formaldehyde-sensitive transcriptional repressor | EBF16_RS27210 | Not Available | - | 4943510 - 4943785 | 9849.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.