Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thua domain-containing protein | EBF16_RS27000 | Not Available | - | 4898133 - 4898981 | 31929.7 |
| mfs transporter | EBF16_RS27005 | Not Available | + | 4899382 - 4900881 | 51628.6 |
| gluconate 2-dehydrogenase subunit 3 family protein | EBF16_RS27010 | Not Available | + | 4900987 - 4901637 | 23255.5 |
| gmc oxidoreductase | EBF16_RS27015 | Not Available | + | 4901634 - 4903316 | 61337.4 |
| nuclear transport factor 2 family protein | EBF16_RS27020 | Not Available | + | 4903313 - 4904143 | 29893.7 |
| mfs transporter | EBF16_RS27025 | Not Available | - | 4904206 - 4905591 | 49887.0 |
| hydroxypyruvate isomerase family protein | EBF16_RS27030 | Not Available | - | 4905656 - 4906423 | 27506.7 |
| tonb-dependent receptor | EBF16_RS27035 | Not Available | - | 4906542 - 4908839 | 83230.2 |
| hypothetical protein | EBF16_RS28995 | Not Available | - | 4908865 - 4909143 | 10148.3 |
| is5/is1182 family transposase | EBF16_RS27040 | Not Available | + | 4909388 - 4910169 | 27987.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.