Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cpaf family protein | EBF16_RS26850 | Not Available | - | 4865994 - 4867526 | 56001.0 |
| hypothetical protein | EBF16_RS26855 | Not Available | - | 4867626 - 4868204 | 21339.5 |
| hypothetical protein | EBF16_RS26860 | Not Available | - | 4868201 - 4870186 | 73144.5 |
| atp synthase f1 subunit epsilon | EBF16_RS26865 | Not Available | - | 4870462 - 4870716 | 8798.5 |
| f0f1 atp synthase subunit beta | EBF16_RS26870 | Not Available | - | 4870870 - 4872315 | 51184.8 |
| f0f1 atp synthase subunit gamma | EBF16_RS26875 | Not Available | - | 4872340 - 4873224 | 31349.8 |
| lyse family translocator | EBF16_RS26880 | Not Available | - | 4873228 - 4873818 | 20252.7 |
| f0f1 atp synthase subunit alpha | EBF16_RS26885 | Not Available | - | 4873861 - 4875390 | 54764.7 |
| f0f1 atp synthase subunit delta | EBF16_RS26890 | Not Available | - | 4875393 - 4875947 | 19067.2 |
| s1c family serine protease | EBF16_RS26895 | Not Available | - | 4876129 - 4877688 | 54808.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.