Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yezd family protein | EBF16_RS26800 | Not Available | - | 4858794 - 4858982 | 7052.48 |
| rbbp9/yden family alpha/beta hydrolase | EBF16_RS26805 | Not Available | - | 4859093 - 4859761 | 24080.4 |
| prc-barrel domain-containing protein | EBF16_RS26810 | Not Available | - | 4859935 - 4860300 | 13925.5 |
| osmc family protein | EBF16_RS26815 | Not Available | + | 4860387 - 4860818 | 14654.5 |
| dmt family transporter | EBF16_RS26820 | Not Available | - | 4860815 - 4861720 | 32413.7 |
| class i sam-dependent methyltransferase | EBF16_RS26825 | Not Available | - | 4861774 - 4862580 | 29055.7 |
| anti-sigma factor family protein | EBF16_RS26830 | Not Available | - | 4862668 - 4863393 | 26107.1 |
| sigma-70 family rna polymerase sigma factor | EBF16_RS26835 | Not Available | - | 4863386 - 4863913 | 20157.1 |
| glycosyltransferase family 4 protein | EBF16_RS26840 | Not Available | - | 4863919 - 4865142 | 43702.4 |
| hypothetical protein | EBF16_RS26845 | Not Available | - | 4865189 - 4865914 | 25893.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.