Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EBF16_RS26750 | Not Available | - | 4846934 - 4848598 | 60496.8 |
| acyltransferase family protein | EBF16_RS26755 | Not Available | + | 4848836 - 4849918 | 38879.2 |
| llm class flavin-dependent oxidoreductase | EBF16_RS26760 | Not Available | - | 4849923 - 4850927 | 35124.9 |
| hpt domain-containing protein | EBF16_RS26765 | Not Available | - | 4850973 - 4851404 | 16154.2 |
| sulfurtransferase tusa family protein | EBF16_RS26770 | Not Available | - | 4851460 - 4851696 | 8402.98 |
| ribosome biogenesis gtpase der | EBF16_RS26775 | Not Available | - | 4851686 - 4853050 | 49955.1 |
| pqq-binding-like beta-propeller repeat protein | EBF16_RS26780 | Not Available | - | 4853083 - 4854432 | 46879.0 |
| tetratricopeptide repeat protein | EBF16_RS26785 | Not Available | - | 4854441 - 4855139 | 25102.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EBF16_RS26790 | Not Available | - | 4855214 - 4856086 | 30927.4 |
| tonb-dependent receptor | EBF16_RS26795 | Not Available | - | 4856167 - 4858626 | 88797.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.