Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6950 family protein | EBF16_RS26490 | Not Available | - | 4806656 - 4807069 | 14984.5 |
| hypothetical protein | EBF16_RS26495 | Not Available | - | 4807073 - 4807729 | 23520.4 |
| hypothetical protein | EBF16_RS26500 | Not Available | - | 4807729 - 4808346 | 22138.9 |
| tolc family outer membrane protein | EBF16_RS26715 | Not Available | + | 4837630 - 4839057 | 50591.1 |
| duf2497 domain-containing protein | EBF16_RS26720 | Not Available | + | 4839127 - 4839615 | 17636.1 |
| alpha/beta hydrolase family protein | EBF16_RS26725 | Not Available | + | 4839757 - 4841829 | 74297.8 |
| hypothetical protein | EBF16_RS26730 | Not Available | + | 4841868 - 4842083 | 7995.74 |
| aaa family atpase | EBF16_RS26735 | Not Available | + | 4842080 - 4842676 | 22022.3 |
| valine--trna ligase | EBF16_RS26740 | Not Available | + | 4842724 - 4845423 | 100611.0 |
| mate family efflux transporter | EBF16_RS26745 | Not Available | + | 4845468 - 4846919 | 51092.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.