Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate--protein phosphotransferase | EBF16_RS26235 | Not Available | + | 4749421 - 4751922 | 87434.5 |
| 1-phosphofructokinase | EBF16_RS26240 | Not Available | + | 4751919 - 4752869 | 32781.7 |
| pts fructose transporter subunit iic | EBF16_RS26245 | Not Available | + | 4752866 - 4754566 | 57027.4 |
| carbohydrate porin | EBF16_RS26250 | Not Available | + | 4754604 - 4755953 | 48997.9 |
| lysr family transcriptional regulator | EBF16_RS26255 | Not Available | - | 4755942 - 4756859 | 33053.2 |
| sdr family nad(p)-dependent oxidoreductase | EBF16_RS26260 | Not Available | + | 4756991 - 4757782 | 27642.1 |
| putative quinol monooxygenase | EBF16_RS26265 | Not Available | + | 4757795 - 4758100 | 11369.4 |
| type 1 glutamine amidotransferase domain-containing protein | EBF16_RS26270 | Not Available | + | 4758143 - 4758982 | 30165.3 |
| rok family transcriptional regulator | EBF16_RS26275 | Not Available | - | 4759031 - 4760179 | 40611.8 |
| rok family protein | EBF16_RS26280 | Not Available | + | 4760869 - 4761849 | 34183.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.