Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS26185 | Not Available | + | 4738487 - 4739281 | 28119.3 |
| cpbp family intramembrane glutamic endopeptidase | EBF16_RS26190 | Not Available | + | 4739278 - 4740168 | 32444.6 |
| rida family protein | EBF16_RS26195 | Not Available | + | 4740242 - 4740655 | 15259.2 |
| alpha/beta hydrolase | EBF16_RS26200 | Not Available | + | 4740725 - 4741717 | 35265.9 |
| hypothetical protein | EBF16_RS26205 | Not Available | + | 4741720 - 4742793 | 39678.7 |
| sdr family nad(p)-dependent oxidoreductase | EBF16_RS26210 | Not Available | - | 4743038 - 4743778 | 25195.1 |
| glycoside hydrolase family 32 protein | EBF16_RS26215 | Not Available | - | 4744459 - 4746075 | 58405.5 |
| class 1 fructose-bisphosphatase | EBF16_RS26220 | Not Available | - | 4746413 - 4747408 | 36626.2 |
| shikimate 5-dehydrogenase | EBF16_RS26225 | Not Available | - | 4747439 - 4748278 | 29720.6 |
| laci family dna-binding transcriptional regulator | EBF16_RS26230 | Not Available | - | 4748283 - 4749290 | 36062.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.