Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is21-like element helper atpase istb | EBF16_RS02540 | Not Available | + | 484476 - 485204 | 27070.8 |
| atp-binding protein | EBF16_RS02545 | Not Available | + | 485447 - 486255 | 28425.9 |
| atp-binding protein | EBF16_RS02550 | Not Available | - | 486465 - 487761 | 48865.9 |
| atp-binding protein | EBF16_RS02555 | Not Available | + | 487915 - 488277 | 13099.4 |
| hypothetical protein | EBF16_RS02560 | Not Available | - | 488302 - 488724 | 14965.9 |
| glycoside hydrolase family 130 protein | EBF16_RS02565 | Not Available | + | 488742 - 490040 | 47385.6 |
| universal stress protein | EBF16_RS02570 | Not Available | - | 490080 - 490913 | 29497.4 |
| 1-phosphofructokinase family hexose kinase | EBF16_RS02575 | Not Available | + | 491263 - 492195 | 32589.0 |
| is5 family transposase | EBF16_RS02580 | Not Available | + | 492379 - 493212 | 31333.0 |
| 2-hydroxyacid dehydrogenase | EBF16_RS02585 | Not Available | - | 493354 - 494391 | 36716.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.