Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 4647707 - 4648091 | Not Available |
| hypothetical protein | EBF16_RS25745 | Not Available | + | 4648147 - 4650141 | 71081.9 |
| j domain-containing protein | EBF16_RS25750 | Not Available | + | 4650191 - 4650739 | 20898.7 |
| hypothetical protein | EBF16_RS25755 | Not Available | + | 4650712 - 4651050 | 11994.6 |
| hypothetical protein | EBF16_RS25760 | Not Available | + | 4651135 - 4651455 | 10829.8 |
| methyl-accepting chemotaxis protein | EBF16_RS25765 | Not Available | + | 4651455 - 4652984 | 53620.3 |
| hemerythrin domain-containing protein | EBF16_RS25770 | Not Available | - | 4652992 - 4653438 | 16696.0 |
| superoxide dismutase | EBF16_RS25775 | Not Available | - | 4653608 - 4654222 | 22457.4 |
| nucleoside diphosphate kinase regulator | EBF16_RS25780 | Not Available | + | 4654643 - 4655053 | 14734.9 |
| septation protein ispz | EBF16_RS25785 | Not Available | - | 4655075 - 4655728 | 23783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.