Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase family protein | EBF16_RS25290 | Not Available | - | 4557840 - 4558469 | 22525.0 |
| 2fe-2s iron-sulfur cluster-binding protein | EBF16_RS25295 | Not Available | + | 4558546 - 4558863 | 11282.2 |
| hypothetical protein | EBF16_RS25300 | Not Available | - | 4558873 - 4559640 | 26719.6 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | EBF16_RS25305 | Not Available | - | 4559726 - 4560466 | 26352.7 |
| Trna-tyr | Not Available | Not Available | + | 4560570 - 4560655 | Not Available |
| dmt family transporter | EBF16_RS25315 | Not Available | + | 4560741 - 4561061 | 11054.0 |
| beta-glucosidase bglx | EBF16_RS25320 | Not Available | + | 4561223 - 4563508 | 81553.8 |
| giy-yig nuclease family protein | EBF16_RS25325 | Not Available | + | 4563540 - 4563839 | 11730.0 |
| catalase/peroxidase hpi | EBF16_RS25330 | Not Available | + | 4564025 - 4566289 | 81539.0 |
| tonb-dependent siderophore receptor | EBF16_RS25335 | Not Available | - | 4566740 - 4568890 | 78693.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.