Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligogalacturonate lyase family protein | EBF16_RS25240 | Not Available | + | 4550272 - 4551594 | 48881.0 |
| hypothetical protein | EBF16_RS25245 | Not Available | + | 4551665 - 4552216 | 19916.9 |
| helix-turn-helix transcriptional regulator | EBF16_RS25250 | Not Available | - | 4552220 - 4552786 | 20241.2 |
| murein l,d-transpeptidase catalytic domain family protein | EBF16_RS25255 | Not Available | + | 4552920 - 4553591 | 23388.1 |
| hypothetical protein | EBF16_RS25260 | Not Available | + | 4553831 - 4554562 | 25515.2 |
| hypothetical protein | EBF16_RS25265 | Not Available | + | 4554580 - 4555254 | 23651.5 |
| hypothetical protein | EBF16_RS25270 | Not Available | - | 4555260 - 4555934 | 25586.8 |
| hypothetical protein | EBF16_RS25275 | Not Available | - | 4556127 - 4556324 | 6672.04 |
| duf4136 domain-containing protein | EBF16_RS25280 | Not Available | + | 4556618 - 4557154 | 19381.8 |
| yidh family protein | EBF16_RS25285 | Not Available | + | 4557168 - 4557800 | 23016.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.