Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rossmann-like and duf2520 domain-containing protein | EBF16_RS25190 | Not Available | - | 4535292 - 4536158 | 29285.2 |
| class i sam-dependent methyltransferase | EBF16_RS25195 | Not Available | - | 4536191 - 4537051 | 30046.6 |
| hypothetical protein | EBF16_RS25200 | Not Available | - | 4537120 - 4537284 | 5753.87 |
| tetr family transcriptional regulator | EBF16_RS25205 | Not Available | - | 4537294 - 4538544 | 45824.3 |
| tonb-dependent receptor | EBF16_RS25210 | Not Available | + | 4538726 - 4540990 | 81713.8 |
| tyrosine-protein phosphatase | EBF16_RS25215 | Not Available | + | 4541013 - 4542104 | 39026.3 |
| succinylglutamate-semialdehyde dehydrogenase | EBF16_RS25220 | Not Available | + | 4542225 - 4543637 | 48854.3 |
| tonb-dependent receptor | EBF16_RS25225 | Not Available | + | 4543999 - 4546713 | 97456.1 |
| duf6250 domain-containing protein | EBF16_RS25230 | Not Available | + | 4546819 - 4547511 | 25409.2 |
| tat pathway signal sequence domain protein | EBF16_RS25235 | Not Available | + | 4547534 - 4550257 | 98729.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.