Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation acetate symporter | EBF16_RS24895 | Not Available | + | 4477914 - 4479620 | 59251.2 |
| duf899 family protein | EBF16_RS24900 | Not Available | + | 4479665 - 4480363 | 26768.6 |
| s10 family peptidase | EBF16_RS24905 | Not Available | - | 4480474 - 4482033 | 56818.6 |
| translational gtpase typa | EBF16_RS24910 | Not Available | + | 4482255 - 4484072 | 66384.2 |
| hypothetical protein | EBF16_RS28945 | Not Available | + | 4484179 - 4484349 | 6373.83 |
| hypothetical protein | EBF16_RS24915 | Not Available | + | 4484457 - 4485632 | 42089.6 |
| sensor histidine kinase | EBF16_RS24920 | Not Available | - | 4485629 - 4486993 | 49285.1 |
| response regulator | EBF16_RS24925 | Not Available | - | 4486990 - 4487721 | 27052.6 |
| intradiol ring-cleavage dioxygenase | EBF16_RS24930 | Not Available | - | 4487766 - 4488668 | 31176.0 |
| mfs transporter | EBF16_RS24935 | Not Available | - | 4488784 - 4490064 | 44755.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.