Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EBF16_RS24805 | Not Available | - | 4459292 - 4462093 | 103340.0 |
| hypothetical protein | EBF16_RS28935 | Not Available | - | 4462226 - 4462366 | 5198.52 |
| opt family oligopeptide transporter | EBF16_RS24810 | Not Available | - | 4462513 - 4464477 | 66657.2 |
| gdsl-type esterase/lipase family protein | EBF16_RS24815 | Not Available | - | 4464568 - 4465356 | 28181.9 |
| heat shock protein hspq | EBF16_RS24820 | Not Available | - | 4465313 - 4465684 | 13922.2 |
| Trna-ser | Not Available | Not Available | + | 4465831 - 4465920 | Not Available |
| cobalamin biosynthesis protein cobg | EBF16_RS24830 | Not Available | + | 4466798 - 4467850 | 37280.8 |
| precorrin-8x methylmutase | EBF16_RS24835 | Not Available | + | 4467850 - 4468479 | 21699.3 |
| precorrin-2 c(20)-methyltransferase | EBF16_RS24840 | Not Available | + | 4468476 - 4469198 | 26180.8 |
| precorrin-3b c(17)-methyltransferase | EBF16_RS24845 | Not Available | + | 4469195 - 4469977 | 27520.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.