Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | EBF16_RS24755 | Not Available | - | 4447832 - 4449127 | 46549.8 |
| cystathionine beta-lyase | EBF16_RS24760 | Not Available | - | 4449124 - 4450332 | 43196.6 |
| 3-mercaptopyruvate sulfurtransferase | EBF16_RS24765 | Not Available | - | 4450329 - 4451177 | 29582.1 |
| hypothetical protein | EBF16_RS24770 | Not Available | - | 4451244 - 4452545 | 44929.3 |
| preq(1) synthase | EBF16_RS24775 | Not Available | + | 4452655 - 4453107 | 16645.9 |
| hypothetical protein | EBF16_RS24780 | Not Available | + | 4453135 - 4453422 | 11263.5 |
| m1 family metallopeptidase | EBF16_RS24785 | Not Available | + | 4453586 - 4456234 | 93418.7 |
| nudix hydrolase | EBF16_RS24790 | Not Available | + | 4456284 - 4456688 | 14614.7 |
| phytase | EBF16_RS24795 | Not Available | - | 4456733 - 4457803 | 36986.7 |
| purple acid phosphatase family protein | EBF16_RS24800 | Not Available | - | 4457815 - 4459215 | 50411.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.